Data Browser v3

Examples - Region: 21:33032075-33040899, Gene: TBK1, Variant: 14-20215709-A-T

Query: ALS2 Variant Count: 82

Variant Effect Allele Count Sample Count Hom Count Heteroz Count Hom Ref Count AF
2-202566591-G-A NON_SYNONYMOUS_CODING 2 3185 0 2 3183 3.14E-4
2-202569221-C-T NON_SYNONYMOUS_CODING 1 3190 0 1 3189 1.567E-4
2-202569251-C-T UTR_3_PRIME 2 3213 0 2 3211 3.112E-4
2-202569283-T-A NON_SYNONYMOUS_CODING 1 3234 0 1 3233 1.546E-4
2-202569884-C-T NON_SYNONYMOUS_CODING 1 3176 0 1 3175 1.574E-4
2-202571646-T-C UTR_3_PRIME 1 3225 0 1 3224 1.55E-4
2-202571733-C-T UTR_3_PRIME 5 3118 0 5 3113 8.018E-4
2-202572706-A-G NON_SYNONYMOUS_CODING 1 3214 0 1 3213 1.556E-4
2-202574666-C-T UTR_3_PRIME 1 3297 0 1 3296 1.517E-4
2-202574689-C-T NON_SYNONYMOUS_CODING 1 3249 0 1 3248 1.539E-4
2-202574690-G-A UTR_3_PRIME 1 3239 0 1 3238 1.544E-4
2-202575717-T-C NON_SYNONYMOUS_CODING 25 3251 0 25 3226 0.0038
2-202575729-C-T UTR_3_PRIME 1 3252 0 1 3251 1.538E-4
2-202575731-T-C NON_SYNONYMOUS_CODING 1 3255 0 1 3254 1.536E-4
2-202580438-T-C NON_SYNONYMOUS_CODING 1 3266 0 1 3265 1.531E-4
2-202580443-T-C NON_SYNONYMOUS_CODING 1 3271 0 1 3270 1.529E-4
2-202580494-C-T NON_SYNONYMOUS_CODING 1 3291 0 1 3290 1.519E-4
2-202580523-C-T UTR_3_PRIME 1 3297 0 1 3296 1.517E-4
2-202580536-G-A NON_SYNONYMOUS_CODING 1 3286 0 1 3285 1.522E-4
2-202582822-C-T NON_SYNONYMOUS_CODING 2 3316 0 2 3314 3.016E-4
2-202582895-A-C UTR_3_PRIME 10 3316 0 10 3306 0.0015
2-202588151-T-C NON_SYNONYMOUS_CODING 1 3316 0 1 3315 1.508E-4
2-202588159-T-TC FRAME_SHIFT 1 3316 0 1 3315 1.508E-4
2-202588160-C-T NON_SYNONYMOUS_CODING 4 3316 0 4 3312 6.031E-4
2-202589088-G-A NON_SYNONYMOUS_CODING 1 3309 0 1 3308 1.511E-4
2-202589093-G-A NON_SYNONYMOUS_CODING 1 3310 0 1 3309 1.511E-4
2-202590107-C-T NON_SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
2-202590117-A-G SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
2-202591249-C-T NON_SYNONYMOUS_CODING 5 3301 0 5 3296 7.573E-4
2-202591484-G-A NON_SYNONYMOUS_CODING 1 3311 0 1 3310 1.51E-4
2-202591491-C-T SYNONYMOUS_CODING 1 3312 0 1 3311 1.51E-4
2-202591522-G-C NON_SYNONYMOUS_CODING 1 3310 0 1 3309 1.511E-4
2-202591523-G-C NON_SYNONYMOUS_CODING 2 3310 0 2 3308 3.021E-4
2-202593239-G-C NON_SYNONYMOUS_CODING 1 3251 0 1 3250 1.538E-4
2-202593280-G-A SYNONYMOUS_CODING 505 3273 24 457 2792 0.0771
2-202593775-C-T INTRON_EXON_BOUNDARY 1 3314 0 1 3313 1.509E-4
2-202593855-G-A NON_SYNONYMOUS_CODING 1 3312 0 1 3311 1.51E-4
2-202598036-G-A NON_SYNONYMOUS_CODING 1 3299 0 1 3298 1.516E-4
2-202598051-C-T NON_SYNONYMOUS_CODING 1 3299 0 1 3298 1.516E-4
2-202598079-TCAGTATTTC-T CODON_DELETION 1 3291 0 1 3290 1.519E-4
2-202598100-T-A NON_SYNONYMOUS_CODING 3 3281 0 3 3278 4.572E-4
2-202598129-T-C NON_SYNONYMOUS_CODING 1 3281 0 1 3280 1.524E-4
2-202606417-G-C SYNONYMOUS_CODING 1 3125 0 1 3124 1.6E-4
2-202606438-G-T SYNONYMOUS_CODING 1 3090 0 1 3089 1.618E-4
2-202606507-G-A SYNONYMOUS_CODING 21 3226 0 21 3205 0.0033
2-202608981-C-G NON_SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
2-202609053-T-C NON_SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
2-202609062-C-T NON_SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
2-202609063-G-A SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
2-202609147-T-C SYNONYMOUS_CODING 1 3313 0 1 3312 1.509E-4
2-202611455-C-G NON_SYNONYMOUS_CODING 1 3287 0 1 3286 1.521E-4
2-202617878-C-T SYNONYMOUS_CODING 3 3306 0 3 3303 4.537E-4
2-202617929-T-C SYNONYMOUS_CODING 3 3311 0 3 3308 4.53E-4
2-202617965-C-T INTRON_EXON_BOUNDARY 6 3307 0 6 3301 9.072E-4
2-202619239-C-T NON_SYNONYMOUS_CODING 3 3312 0 3 3309 4.529E-4
2-202619243-G-A SYNONYMOUS_CODING 1 3316 0 1 3315 1.508E-4
2-202619333-G-A SYNONYMOUS_CODING 1 3309 0 1 3308 1.511E-4
2-202619357-T-C SYNONYMOUS_CODING 1 3304 0 1 3303 1.513E-4
2-202622173-T-C NON_SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
2-202622248-T-A NON_SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
2-202622306-A-G SYNONYMOUS_CODING 1 3307 0 1 3306 1.512E-4
2-202622331-A-G NON_SYNONYMOUS_CODING 1 3297 0 1 3296 1.517E-4
2-202622342-C-T SYNONYMOUS_CODING 1 3300 0 1 3299 1.515E-4
2-202622467-C-T NON_SYNONYMOUS_CODING 1 3150 0 1 3149 1.587E-4
2-202622481-G-C NON_SYNONYMOUS_CODING 10 3046 0 10 3036 0.0016
2-202625615-C-T NON_SYNONYMOUS_CODING 5925 3313 2651 623 39 0.8942
2-202625668-C-T NON_SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
2-202625700-G-A SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
2-202625720-C-A NON_SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
2-202625761-G-A NON_SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
2-202625770-T-C NON_SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
2-202625858-C-G NON_SYNONYMOUS_CODING 1 3315 0 1 3314 1.508E-4
2-202625992-A-G NON_SYNONYMOUS_CODING 2 3303 0 2 3301 3.028E-4
2-202626141-C-G SYNONYMOUS_CODING 1 3314 0 1 3313 1.509E-4
2-202626189-G-A SYNONYMOUS_CODING 1 3315 0 1 3314 1.508E-4
2-202626225-T-C SYNONYMOUS_CODING 1 3314 0 1 3313 1.509E-4
2-202626228-C-T SYNONYMOUS_CODING 1 3314 0 1 3313 1.509E-4
2-202626242-C-T NON_SYNONYMOUS_CODING 1 3312 0 1 3311 1.51E-4
2-202626269-C-G NON_SYNONYMOUS_CODING 1 3312 0 1 3311 1.51E-4
2-202626351-C-T SYNONYMOUS_CODING 1 3296 0 1 3295 1.517E-4
2-202626381-C-G SYNONYMOUS_CODING 1 3266 0 1 3265 1.531E-4
2-202632092-T-C NON_SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4