Data Browser v3

Examples - Region: 21:33032075-33040899, Gene: TBK1, Variant: 14-20215709-A-T

Query: CNTN4 Variant Count: 65

Variant Effect Allele Count Sample Count Hom Count Heteroz Count Hom Ref Count AF
3-2613197-C-G NON_SYNONYMOUS_CODING 1 3304 0 1 3303 1.513E-4
3-2613218-C-A NON_SYNONYMOUS_CODING 1 3295 0 1 3294 1.517E-4
3-2613232-G-A SYNONYMOUS_CODING 1 3286 0 1 3285 1.522E-4
3-2613232-G-C NON_SYNONYMOUS_CODING 12 3286 0 12 3274 0.0018
3-2777927-T-C SYNONYMOUS_CODING 2 3317 0 2 3315 3.015E-4
3-2787233-C-T SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
3-2787239-T-G SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
3-2787328-C-T NON_SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
3-2787332-A-G SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
3-2787338-G-A SYNONYMOUS_CODING 1 3316 0 1 3315 1.508E-4
3-2861174-T-C SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
3-2861180-C-T SYNONYMOUS_CODING 2 3317 0 2 3315 3.015E-4
3-2861206-T-C NON_SYNONYMOUS_CODING 2 3317 0 2 3315 3.015E-4
3-2908512-G-A UTR_5_PRIME 2 3250 0 2 3248 3.077E-4
3-2908513-A-G NON_SYNONYMOUS_CODING 1 3251 0 1 3250 1.538E-4
3-2908518-G-C UTR_5_PRIME 1 3245 0 1 3244 1.541E-4
3-2908537-A-C NON_SYNONYMOUS_CODING 2 3229 0 2 3227 3.097E-4
3-2924838-G-A NON_SYNONYMOUS_CODING 1 3281 0 1 3280 1.524E-4
3-2924871-C-T NON_SYNONYMOUS_CODING 1 3299 0 1 3298 1.516E-4
3-2924883-C-T NON_SYNONYMOUS_CODING 1 3295 0 1 3294 1.517E-4
3-2928727-A-C SYNONYMOUS_CODING 1 3316 0 1 3315 1.508E-4
3-2928874-G-C UTR_3_PRIME 11 3317 0 11 3306 0.0017
3-2942406-C-T START_GAINED 5 3298 0 5 3293 7.58E-4
3-2942420-A-G NON_SYNONYMOUS_CODING 1 3303 0 1 3302 1.514E-4
3-2942427-C-A UTR_3_PRIME 1 3301 0 1 3300 1.515E-4
3-2942487-C-A UTR_3_PRIME 4 3302 0 4 3298 6.057E-4
3-2942488-G-A NON_SYNONYMOUS_CODING 2 3300 0 2 3298 3.03E-4
3-2944606-A-G NON_SYNONYMOUS_CODING 1 3296 0 1 3295 1.517E-4
3-2944623-A-G NON_SYNONYMOUS_CODING 1 3298 0 1 3297 1.516E-4
3-2967358-T-C NON_SYNONYMOUS_CODING 2 3317 0 2 3315 3.015E-4
3-3030102-A-G NON_SYNONYMOUS_CODING 1 3313 0 1 3312 1.509E-4
3-3030119-T-C UTR_3_PRIME 1 3313 0 1 3312 1.509E-4
3-3067795-G-A NON_SYNONYMOUS_CODING 1 3216 0 1 3215 1.555E-4
3-3067801-T-G NON_SYNONYMOUS_CODING 1 3218 0 1 3217 1.554E-4
3-3067852-C-T NON_SYNONYMOUS_CODING 1 3278 0 1 3277 1.525E-4
3-3067864-C-T NON_SYNONYMOUS_CODING 2 3278 0 2 3276 3.051E-4
3-3067903-T-C NON_SYNONYMOUS_CODING 1 3280 0 1 3279 1.524E-4
3-3072589-T-C UTR_3_PRIME 1 3260 0 1 3259 1.534E-4
3-3072619-T-G NON_SYNONYMOUS_CODING 5 3242 0 5 3237 7.711E-4
3-3076351-G-A NON_SYNONYMOUS_CODING 1 3253 0 1 3252 1.537E-4
3-3076367-C-G NON_SYNONYMOUS_CODING 1 3259 0 1 3258 1.534E-4
3-3076388-C-T NON_SYNONYMOUS_CODING 2 3240 0 2 3238 3.086E-4
3-3076389-C-T UTR_3_PRIME 1 3240 0 1 3239 1.543E-4
3-3078875-T-C NON_SYNONYMOUS_CODING 1 3293 0 1 3292 1.518E-4
3-3078948-A-T UTR_3_PRIME 1 3272 0 1 3271 1.528E-4
3-3078965-T-C NON_SYNONYMOUS_CODING 1 3256 0 1 3255 1.536E-4
3-3080621-C-T UTR_3_PRIME 5 3304 0 5 3299 7.567E-4
3-3080625-G-T NON_SYNONYMOUS_CODING 2 3304 0 2 3302 3.027E-4
3-3081723-G-A INTRON_EXON_BOUNDARY 1 3309 0 1 3308 1.511E-4
3-3081752-G-A NON_SYNONYMOUS_CODING 1 3315 0 1 3314 1.508E-4
3-3081762-T-C UTR_3_PRIME 3 3316 0 3 3313 4.524E-4
3-3081933-G-A UTR_3_PRIME 1 3307 0 1 3306 1.512E-4
3-3084044-G-C NON_SYNONYMOUS_CODING 1 3309 0 1 3308 1.511E-4
3-3084045-A-T NON_SYNONYMOUS_CODING 12 3309 0 12 3297 0.0018
3-3084074-G-A NON_SYNONYMOUS_CODING 1 3305 0 1 3304 1.513E-4
3-3084747-C-G NON_SYNONYMOUS_CODING 4 3279 0 4 3275 6.099E-4
3-3084816-T-A NON_SYNONYMOUS_CODING 1 3115 0 1 3114 1.605E-4
3-3085292-C-T SYNONYMOUS_CODING 2 3317 0 2 3315 3.015E-4
3-3085321-C-A NON_SYNONYMOUS_CODING 1 3317 0 1 3316 1.507E-4
3-3085337-T-C SYNONYMOUS_CODING 2 3317 0 2 3315 3.015E-4
3-3095549-C-T NON_SYNONYMOUS_CODING 1 3304 0 1 3303 1.513E-4
3-3095607-C-T SYNONYMOUS_CODING 3 3314 0 3 3311 4.526E-4
3-3095610-C-T SYNONYMOUS_CODING 1 3316 0 1 3315 1.508E-4
3-3097811-C-T SYNONYMOUS_CODING 1 3315 0 1 3314 1.508E-4
3-3097813-C-T NON_SYNONYMOUS_CODING 1 3314 0 1 3313 1.509E-4